Publications
-
Genomically diverse carbapenem resistant Enterobacteriaceae fromwild birds provide insight into global patterns of spatiotemporal dissemination.
(2022). Science of the Total Environment, . vol. 824 DOI -
Evaluation of In Vitro Activity of Double-Carbapenem Combinations against KPC-2-, OXA-48-and NDM-Producing Escherichia coli and Klebsiella pneumoniae.
(2022). Antibiotics, . vol. 11 DOI -
A simple cut and stretch assay to detect antimicrobial resistance genes on bacterial plasmids by single-molecule fluorescence microscopy.
(2022). Scientific Reports, . vol. 12 DOI -
Metallo-β-Lactamase Inhibitor Phosphonamidate Monoesters.
(2022). ACS Omega, . vol. 7, ss. 4550-4562 DOI -
Evolutionary Trajectories toward High-Level β-Lactam/β-Lactamase Inhibitor Resistance in the Presence of Multiple β-Lactamases.
(2022). Antimicrobial Agents and Chemotherapy, . vol. 66 DOI -
The Role of Antibiotic Resistance Genes in the Fitness Cost of Multiresistance Plasmids.
(2022). mBio, . vol. 13 DOI -
Naked-eye detection of antibiotic resistance gene sul1 based on aggregation of magnetic nanoparticles and DNA amplification products.
(2022). Biosensors and Bioelectronics: X, . vol. 12 DOI -
Modular 3D-Printed Peg Biofilm Device for Flexible Setup of Surface-Related Biofilm Studies.
(2022). Frontiers in Cellular and Infection Microbiology, . vol. 11 DOI -
Selection of Resistant Bacteria in Mallards Exposed to Subinhibitory Concentrations of Ciprofloxacin in Their Water Environment.
(2021). Antimicrobial Agents and Chemotherapy, . vol. 65 DOI -
Detection of structural variations in densely-labelled optical DNA barcodes: A hidden Markov model approach.
(2021). PLOS ONE, . vol. 16, ss. e0259670-e0259670 DOI -
A Parallelized Nanofluidic Device for High-Throughput Optical DNA Mapping of Bacterial Plasmids.
(2021). Micromachines, vol. 12 DOI -
Dynamics of Extensive Drug Resistance Evolution of Mycobacterium tuberculosis in a Single Patient During 9 Years of Disease and Treatment.
(2020). Journal of Infectious Diseases, . vol. 225, ss. 1011-1020 DOI -
Cultivation-Free Typing of Bacteria Using Optical DNA Mapping.
(2020). ACS INFECTIOUS DISEASES, vol. 6, ss. 1076-1084 DOI -
Efficacy of Antibiotic Combinations against Multidrug-Resistant Pseudomonas aeruginosa in Automated Time-Lapse Microscopy and Static Time-Kill Experiments.
(2020). Antimicrobial Agents and Chemotherapy, . vol. 64 DOI -
Optical DNA Mapping Combined with Cas9-Targeted Resistance Gene Identification for Rapid Tracking of Resistance Plasmids in a Neonatal Intensive Care Unit Outbreak.
(2019). mBio, . vol. 10 DOI -
Dynamics of Resistance Plasmids in Extended-Spectrum-beta-Lactamase-Producing Enterobacteriaceae during Postinfection Colonization.
(2019). Antimicrobial Agents and Chemotherapy, . vol. 63 DOI -
Genome and plasmid diversity of Extended-Spectrum beta-Lactamase-producing Escherichia coli ST131-tracking phylogenetic trajectories with Bayesian inference.
(2019). Scientific Reports, . vol. 9 DOI -
Low sub-minimal inhibitory concentrations of antibiotics generate new types of resistance.
(2019). Sustainable Chemistry and Pharmacy, vol. 11 11, ss. 46 46-48 48 DOI -
Facilitated sequence assembly using densely labeled optical DNA barcodes: A combinatorial auction approach.
(2018). PLOS ONE, vol. 13 DOI -
Long-term carriage and rapid transmission of extended spectrum beta-lactamase-producing E. coli within a flock of Mallards in the absence of antibiotic selection.
(2018). Environmental Microbiology Reports, vol. 10, ss. 576-582 DOI -
A bla(OXA-181)-harbouring multi-resistant ST147 Klebsiella pneumoniae isolate from Pakistan that represent an intermediate stage towards pan-drug resistance.
(2017). PLOS ONE, . vol. 12 DOI -
Combinations of mutations in envZ, ftsI, mrdA, acrB and acrR can cause high-level carbapenem resistance in Escherichia coli.
(2016). Journal of Antimicrobial Chemotherapy, vol. 71, ss. 1188-1198 DOI -
Characterization of ESBL disseminating plasmids.
(2016). INFECTIOUS DISEASES, vol. 48, ss. 18-25 DOI -
Fitness of Escherichia coli mutants with reduced susceptibility to tigecycline.
(2016). Journal of Antimicrobial Chemotherapy, vol. 71, ss. 1307-1313 DOI -
Potential of tetracycline resistance proteins to evolve tigecycline resistance.
(2016). Antimicrobial Agents and Chemotherapy, vol. 60, ss. 789-796 DOI -
Direct identification of antibiotic resistance genes on single plasmid molecules using CRISPR/Cas9 in combination with optical DNA mapping.
(2016). Scientific Reports, vol. 6 DOI -
Rapid identification of intact bacterial resistance plasmids via optical mapping of single DNA molecules.
(2016). Scientific Reports, vol. 6 DOI -
A pharmacokinetic-pharmacodynamic model characterizing the emergence of resistant Escherichia coli subpopulations during ertapenem exposure.
(2016). Journal of Antimicrobial Chemotherapy, vol. 71, ss. 2521-2533 DOI -
Fast size-determination of intact bacterial plasmids using nanofluidic channels.
(2015). Lab on a Chip, vol. 15, ss. 2739-2743 DOI -
High Fitness Costs and Instability of Gene Duplications Reduce Rates of Evolution of New Genes by Duplication-Divergence Mechanisms.
(2014). Molecular biology and evolution, vol. 31, ss. 1526-1535 DOI -
Selection of a multidrug resistance plasmid by sublethal levels of antibiotics and heavy metals.
(2014). mBio, vol. 5, ss. e01918-14- DOI -
The Gull (Chroicocephalus brunnicephalus) as an Environmental Bioindicator and Reservoir for Antibiotic Resistance on the Coastlines of the Bay of Bengal.
(2014). Microbial Drug Resistance, vol. 20, ss. 466-471 DOI -
Time lapse investigation of antibiotic susceptibility using a microfluidic linear gradient 3D culture device.
(2014). Lab on a Chip, vol. 14, ss. 3409-3418 DOI -
Selection of Orphan Rhs Toxin Expression in Evolved Salmonella enterica Serovar Typhimurium.
(2014). PLOS Genetics, vol. 10, ss. e1004255- DOI -
Selection of antibiotic resistance at very low antibiotic concentrations.
(2014). Upsala Journal of Medical Sciences, vol. 119, ss. 103-107 DOI -
Silver resistance genes are overrepresented among Escherichia coli isolates with CTX-M production.
(2014). Applied and Environmental Microbiology, vol. 80, ss. 6863-6869 DOI -
Influence of acquired β-lactamases on the evolution of spontaneous carbapenem resistance in Escherichia coli.
(2013). Journal of Antimicrobial Chemotherapy, vol. 68, ss. 51-59 DOI -
Plasmidome-Analysis of ESBL-Producing Escherichia coli Using Conventional Typing and High-Throughput Sequencing.
(2013). PLOS ONE, vol. 8, ss. e65793- DOI -
Pathoadaptive Mutations in Salmonella enterica Isolated after Serial Passage in Mice.
(2013). PLOS ONE, vol. 8, ss. e70147- DOI -
Mechanisms and fitness costs of tigecycline resistance in Escherichia coli.
(2013). Journal of Antimicrobial Chemotherapy, vol. 68, ss. 2809-2819 DOI -
Frequent emergence of porin-deficient subpopulations with reduced carbapenem susceptibility in ESBL-producing Escherichia coli during exposure to ertapenem in an in vitro pharmacokinetic model.
(2013). Journal of Antimicrobial Chemotherapy, vol. 68, ss. 1319-1326 DOI -
Antimicrobial Drug-Resistant Escherichia coli in Wild Birds and Free-range Poultry, Bangladesh.
(2012). Emerging Infectious Diseases, vol. 18, ss. 2055-2058 DOI -
Transfer of an Escherichia coli ST131 multiresistance cassette has created a Klebsiella pneumoniae-specific plasmid associated with a major nosocomial outbreak.
(2012). Journal of Antimicrobial Chemotherapy, vol. 67, ss. 74-83 DOI -
Selection of Resistant Bacteria at Very Low Antibiotic Concentrations.
(2011). PLoS pathogens, vol. 7, ss. e1002158- DOI -
Genomic Stability over 9 Years of an Isoniazid Resistant Mycobacterium tuberculosis Outbreak Strain in Sweden.
(2011). PLoS ONE, vol. 6, ss. e16647- DOI -
Bacterial gene amplification: implications for the evolution of antibiotic resistance.
(2009). Nature Reviews Microbiology, vol. 7, ss. 578-588 DOI -
The first major extended-spectrum beta-lactamase outbreak in Scandinavia was caused by clonal spread of a multiresistant Klebsiella pneumoniae producing CTX-M-15.
(2008). Acta Pathologica, Microbiologica et Immunologica Scandinavica (APMIS), vol. 116, ss. 302-8 DOI -
Nitrofurantoin resistance mechanism and fitness cost in Escherichia coli.
(2008). Journal of Antimicrobial Chemotherapy, vol. 62, ss. 495-503 DOI